EnhancerDB
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  3. rs75759563[chr16:1339299]
Enhancers that have rs75759563[chr16:1339299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr16 1339188 1339523 vista21544
VISTA
Transcript factors that have rs75759563[chr16:1339299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 21684538
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 108171312
chr16 1337361 1339591 TCF7L2 GTRD no Colon (HCT116) 21684541
chr16 1337361 1339591 TCF7L2 GTRD no Colon (HCT116) 108171313
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 21684544
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171314
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171315
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171316
chr16 1337589 1339388 ZNF143 GTRD no Epithelial (MCF-7) 21684546
chr16 1337589 1339388 ZNF143 GTRD no Epithelial (MCF-7) 108171317
chr16 1337804 1339504 TCF7L2 GTRD no Colon (HCT116) 21684554
chr16 1337804 1339504 TCF7L2 GTRD no Colon (HCT116) 108171318
chr16 1338135 1339387 TCF7L2 GTRD no Colon (HCT116) 21684571
chr16 1338135 1339387 TCF7L2 GTRD no Colon (HCT116) 108171319
chr16 1338717 1339313 ZNF274 GTRD no Blood (GM12878) 108171321
chr16 1338856 1339442 TCF7L2 GTRD no Colon (HCT116) 21684575
chr16 1338856 1339442 TCF7L2 GTRD no Colon (HCT116) 108171323
chr16 1338878 1339729 TCF7L2 GTRD no Colon (HCT116) 21684576
chr16 1338878 1339729 TCF7L2 GTRD no Colon (HCT116) 108171324
chr16 1339175 1339399 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684577
chr16 1339175 1339399 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108171325
chr16 1339200 1339476 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108171326
chr16 1339227 1339467 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108171327
chr16 1339294 1339308 NR2F1 JASPAR yes 9148405
chr16 1339294 1339308 NR2F1 JASPAR yes 49326434
Genes associated with rs75759563[chr16:1339299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More