EnhancerDB
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  3. rs75829264[chr6:110839530]
Enhancers that have rs75829264[chr6:110839530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs75829264[chr6:110839530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110839526 110839536 NFIA JASPAR yes 104292687
chr6 110839528 110839534 NFIC JASPAR yes 104292688
chr6 110839529 110839539 ALX3 JASPAR yes 104292689
chr6 110839529 110839539 ESX1 JASPAR yes 104292690
chr6 110839529 110839539 GBX2 JASPAR yes 104292691
chr6 110839529 110839539 GSX1 JASPAR yes 104292692
chr6 110839529 110839539 GSX2 JASPAR yes 104292693
chr6 110839529 110839539 HESX1 JASPAR yes 104292694
chr6 110839529 110839539 LBX2 JASPAR yes 104292695
chr6 110839529 110839539 LHX2 JASPAR yes 104292696
chr6 110839529 110839539 MIXL1 JASPAR yes 104292697
chr6 110839529 110839539 MNX1 JASPAR yes 104292698
chr6 110839529 110839539 RAX JASPAR yes 104292699
chr6 110839529 110839540 HOXA10 JASPAR yes 104292700
chr6 110839530 110839534 H1TF2 TRANSFAC yes 104292701
chr6 110839530 110839534 NFE TRANSFAC yes 104292702
chr6 110839530 110839534 SRF TRANSFAC yes 104292703
chr6 110839530 110839538 BARX1 JASPAR yes 104292704
chr6 110839530 110839538 BSX JASPAR yes 104292705
chr6 110839530 110839538 DLX6 JASPAR yes 104292706
chr6 110839530 110839538 ISX JASPAR yes 104292707
chr6 110839530 110839538 LBX1 JASPAR yes 104292708
chr6 110839530 110839538 LHX9 JASPAR yes 104292709
chr6 110839530 110839538 MSX1 JASPAR yes 104292710
chr6 110839530 110839538 MSX2 JASPAR yes 104292711
chr6 110839530 110839538 NKX6-2 JASPAR yes 104292712
chr6 110839530 110839538 PRRX1 JASPAR yes 104292713
chr6 110839530 110839538 RAX2 JASPAR yes 104292714
chr6 110839530 110839538 SHOX JASPAR yes 104292715
chr6 110839530 110839538 UNCX JASPAR yes 104292716
chr6 110839530 110839540 HOXA13 JASPAR yes 104292717
chr6 110839530 110839540 HOXB13 JASPAR yes 104292718
chr6 110839530 110839540 HOXD13 JASPAR yes 104292719
Genes associated with rs75829264[chr6:110839530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More