EnhancerDB
  1. Home
  2. SNP
  3. rs75880456[chr12:125120583]
Enhancers that have rs75880456[chr12:125120583]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125108500 125127069 enh15092
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs75880456[chr12:125120583]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125120579 125120590 CDX2 JASPAR yes 124402232
chr12 125120580 125120591 HOXA10 JASPAR yes 124402233
chr12 125120581 125120590 CDX1 JASPAR yes 124402234
chr12 125120581 125120591 HOXA13 JASPAR yes 124402235
chr12 125120581 125120591 HOXB13 JASPAR yes 124402236
chr12 125120581 125120591 HOXD13 JASPAR yes 124402237
chr12 125120581 125121395 ZNF143 GTRD no Epithelial (MCF-7) 21581425
Genes associated with rs75880456[chr12:125120583], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More