EnhancerDB
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  3. rs75887028[chr12:117046779]
Enhancers that have rs75887028[chr12:117046779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs75887028[chr12:117046779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117044915 117046932 TCF7L2 GTRD no Colon (HCT116) 21577766
chr12 117044964 117047152 ZNF274 GTRD no Bone Marrow (K562) 21577770
chr12 117045568 117047402 ZNF143 GTRD no Epithelial (MCF-7) 21577781
chr12 117045642 117046781 ZNF274 GTRD no Bone Marrow (K562) 21577782
chr12 117045864 117046933 TCF7L2 GTRD no Colon (HCT116) 21577790
chr12 117046033 117047104 TCF7L2 GTRD no Colon (HCT116) 21577801
chr12 117046177 117046938 TCF7L2 GTRD no Colon (HCT116) 21577804
chr12 117046330 117047401 ZNF143 GTRD no Epithelial (MCF-7) 21577805
chr12 117046476 117046886 TCF7L2 GTRD no Colon (HCT116) 21577807
chr12 117046765 117046784 REST JASPAR yes 124014845
chr12 117046768 117046789 ZNF263 JASPAR yes 124014846
chr12 117046772 117046782 SP1 JASPAR yes 124014847
chr12 117046773 117046781 SP1 TRANSFAC yes 124014848
chr12 117046773 117046782 SP1 TRANSFAC yes 124014849
chr12 117046773 117046783 SP1 JASPAR yes 124014850
chr12 117046774 117046779 SP1 TRANSFAC yes 124014851
chr12 117046775 117046780 SP1 TRANSFAC yes 124014852
chr12 117046775 117046781 SP1 TRANSFAC yes 124014853
Genes associated with rs75887028[chr12:117046779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More