EnhancerDB
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  3. rs75888679[chr19:12899978]
Enhancers that have rs75888679[chr19:12899978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
chr19 12899457 12901460 vista28658
VISTA
Transcript factors that have rs75888679[chr19:12899978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12899115 12900772 ZNF274 GTRD no Blood (GM12878) 108386454
chr19 12899221 12900788 ZNF274 GTRD no Blood (GM12878) 108386457
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386458
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386459
chr19 12899404 12900000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386477
chr19 12899479 12900815 ZNF274 GTRD no Blood (GM12878) 108386518
chr19 12899485 12899985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386522
chr19 12899511 12900580 ZNF274 GTRD no Blood (GM12878) 108386529
chr19 12899514 12900725 ZNF274 GTRD no Blood (GM12878) 108386530
chr19 12899551 12900105 ZNF274 GTRD no Blood (GM12878) 108386534
chr19 12899598 12900882 ZNF274 GTRD no Blood (GM12878) 108386542
chr19 12899600 12900120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386543
chr19 12899605 12900607 ZNF274 GTRD no Blood (GM12878) 108386545
chr19 12899637 12900711 ZNF274 GTRD no Blood (GM12878) 108386547
chr19 12899643 12900163 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386548
chr19 12899658 12900565 ZNF274 GTRD no Blood (GM12878) 108386549
chr19 12899662 12900653 ZNF274 GTRD no Blood (GM12878) 108386550
chr19 12899676 12900673 ZNF274 GTRD no Blood (GM12878) 108386551
chr19 12899681 12900700 ZNF274 GTRD no Blood (GM12878) 108386552
chr19 12899685 12900707 ZNF274 GTRD no Blood (GM12878) 108386553
chr19 12899694 12900412 ZNF274 GTRD no Blood (GM12878) 108386554
chr19 12899696 12900523 ZNF274 GTRD no Blood (GM12878) 108386555
chr19 12899712 12900636 ZNF274 GTRD no Blood (GM12878) 108386556
chr19 12899712 12900687 ZNF274 GTRD no Blood (GM12878) 108386557
chr19 12899714 12900648 ZNF274 GTRD no Blood (GM12878) 108386558
chr19 12899714 12900704 ZNF274 GTRD no Blood (GM12878) 108386559
chr19 12899716 12900761 ZNF274 GTRD no Blood (GM12878) 108386560
chr19 12899717 12900554 ZNF274 GTRD no Blood (GM12878) 108386561
chr19 12899719 12900379 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386562
chr19 12899729 12900659 ZNF274 GTRD no Blood (GM12878) 108386563
chr19 12899730 12900644 ZNF274 GTRD no Blood (GM12878) 108386564
chr19 12899732 12900380 ZNF274 GTRD no Blood (GM12878) 108386565
chr19 12899743 12900204 ZNF274 GTRD no Blood (GM12878) 108386566
chr19 12899748 12900546 ZNF274 GTRD no Blood (GM12878) 108386567
chr19 12899758 12900465 ZNF274 GTRD no Blood (GM12878) 108386568
chr19 12899764 12900608 ZNF274 GTRD no Blood (GM12878) 108386569
chr19 12899775 12900563 ZNF274 GTRD no Blood (GM12878) 108386571
chr19 12899780 12900579 ZNF274 GTRD no Blood (GM12878) 108386572
chr19 12899782 12900214 ZNF274 GTRD no Blood (GM12878) 108386573
chr19 12899783 12900568 ZNF274 GTRD no Blood (GM12878) 108386574
chr19 12899784 12900701 ZNF274 GTRD no Blood (GM12878) 108386575
chr19 12899789 12900279 ZNF274 GTRD no Blood (GM12878) 108386576
chr19 12899794 12900424 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386577
chr19 12899799 12900381 ZNF274 GTRD no Blood (GM12878) 108386578
chr19 12899812 12900719 ZNF274 GTRD no Blood (GM12878) 108386579
chr19 12899817 12900789 ZNF274 GTRD no Blood (GM12878) 108386580
chr19 12899831 12900665 ZNF274 GTRD no Blood (GM12878) 108386581
chr19 12899833 12900374 ZNF274 GTRD no Blood (GM12878) 108386582
chr19 12899881 12900257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849903
chr19 12899881 12900257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386583
chr19 12899896 12900332 ZNF274 GTRD no Blood (GM12878) 108386584
chr19 12899960 12900344 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849904
chr19 12899960 12900344 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386585
chr19 12899965 12899980 HNF4G JASPAR yes 70806480
chr19 12899965 12899980 HNF4G JASPAR yes 112494166
Genes associated with rs75888679[chr19:12899978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More