EnhancerDB
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  3. rs75993676[chr1:42230444]
Enhancers that have rs75993676[chr1:42230444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 42230379 42230587 vista1353
VISTA
Transcript factors that have rs75993676[chr1:42230444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42230434 42230455 IRF1 JASPAR yes 28419376
chr1 42230434 42230455 IRF1 JASPAR yes 118279889
chr1 42230438 42230452 STAT1 JASPAR yes 28419377
chr1 42230438 42230452 STAT1 JASPAR yes 118279890
chr1 42230438 42230453 PRDM1 JASPAR yes 28419378
chr1 42230438 42230453 STAT2 JASPAR yes 28419379
chr1 42230438 42230453 PRDM1 JASPAR yes 118279891
chr1 42230438 42230453 STAT2 JASPAR yes 118279892
chr1 42230443 42230454 NFKB1 JASPAR yes 28419380
chr1 42230443 42230454 NFKB1 JASPAR yes 118279893
Genes associated with rs75993676[chr1:42230444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More