EnhancerDB
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  3. rs76076103[chr17:53534167]
Enhancers that have rs76076103[chr17:53534167]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs76076103[chr17:53534167]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53534161 53534171 ALX3 JASPAR yes 54853688
chr17 53534161 53534171 MNX1 JASPAR yes 54853689
chr17 53534162 53534170 LMX1A JASPAR yes 54853690
chr17 53534162 53534170 LMX1B JASPAR yes 54853691
chr17 53534162 53534170 NKX6-1 JASPAR yes 54853692
chr17 53534162 53534170 NKX6-2 JASPAR yes 54853693
chr17 53534162 53534170 VAX1 JASPAR yes 54853694
chr17 53534162 53534170 VAX2 JASPAR yes 54853695
chr17 53534162 53534170 VSX1 JASPAR yes 54853696
chr17 53534162 53534170 VSX2 JASPAR yes 54853697
chr17 53534167 53534171 TEAD2 TRANSFAC yes 54853698
Genes associated with rs76076103[chr17:53534167], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More