EnhancerDB
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  3. rs76240509[chr17:53528784]
Enhancers that have rs76240509[chr17:53528784]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs76240509[chr17:53528784]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53528594 53529098 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772690
chr17 53528650 53529094 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21772691
chr17 53528699 53528955 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21772692
chr17 53528700 53529036 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21772693
chr17 53528719 53529015 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21772694
chr17 53528727 53529007 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772695
chr17 53528778 53528784 MZF1 JASPAR yes 54852745
Genes associated with rs76240509[chr17:53528784], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More