EnhancerDB
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  3. rs76403909[chr17:76869739]
Enhancers that have rs76403909[chr17:76869739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76867725 76884335 enh17416
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs76403909[chr17:76869739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76867085 76873854 ZBTB33 GTRD no Brain (SK-N-SH) 21795231
chr17 76867085 76873854 ZBTB33 GTRD no Brain (SK-N-SH) 108304128
chr17 76867339 76873992 TCF7L2 GTRD no Colon (HCT116) 21795232
chr17 76867339 76873992 TCF7L2 GTRD no Colon (HCT116) 108304129
chr17 76867349 76873907 TCF7L2 GTRD no Colon (HCT116) 21795233
chr17 76867349 76873907 TCF7L2 GTRD no Colon (HCT116) 108304130
chr17 76868772 76873927 ZBTB33 GTRD no Lung (A549) 108304131
chr17 76869737 76869747 GSC2 JASPAR yes 56184257
chr17 76869737 76869747 GSC JASPAR yes 56184258
chr17 76869737 76869754 ZNF410 JASPAR yes 56184259
chr17 76869738 76869746 OTX1 JASPAR yes 56184260
chr17 76869738 76869746 OTX2 JASPAR yes 56184261
chr17 76869738 76869747 PITX3 JASPAR yes 56184262
chr17 76869739 76869754 STAT1 JASPAR yes 56184263
Genes associated with rs76403909[chr17:76869739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More