EnhancerDB
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  3. rs76848079[chr12:47616386]
Enhancers that have rs76848079[chr12:47616386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47604098 47625535 enh2315
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs76848079[chr12:47616386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47615323 47617229 ZNF274 GTRD no Bone Marrow (K562) 108028498
chr12 47615647 47616739 ZNF274 GTRD no Bone Marrow (K562) 108028499
chr12 47616162 47616628 ZNF143 GTRD no Epithelial (MCF-7) 21543113
chr12 47616162 47616628 ZNF143 GTRD no Epithelial (MCF-7) 108028500
chr12 47616273 47617037 ZNF274 GTRD no Cervix (HeLa-S3) 21543114
chr12 47616273 47617037 ZNF274 GTRD no Cervix (HeLa-S3) 108028501
chr12 47616279 47616610 ZNF274 GTRD no Bone Marrow (K562) 108028502
chr12 47616328 47616883 ZNF274 GTRD no Bone Marrow (K562) 108028503
chr12 47616339 47616817 ZNF274 GTRD no Bone Marrow (K562) 108028504
chr12 47616356 47616950 ZNF274 GTRD no Cervix (HeLa-S3) 21543115
chr12 47616356 47616950 ZNF274 GTRD no Cervix (HeLa-S3) 108028505
chr12 47616360 47616703 ZNF143 GTRD no Epithelial (MCF-7) 21543116
chr12 47616360 47616703 ZNF143 GTRD no Epithelial (MCF-7) 108028506
chr12 47616366 47616622 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028507
chr12 47616372 47616805 ZNF274 GTRD no Liver (HepG2) 108028508
chr12 47616382 47616391 NKX3-2 JASPAR yes 120685962
chr12 47616383 47616391 ISL2 JASPAR yes 120685963
Genes associated with rs76848079[chr12:47616386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More