EnhancerDB
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  3. rs76999858[chr1:154824002]
Enhancers that have rs76999858[chr1:154824002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs76999858[chr1:154824002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154824000 154824010 ALX3 JASPAR yes 32318798
chr1 154824000 154824010 ESX1 JASPAR yes 32318799
chr1 154824000 154824010 HESX1 JASPAR yes 32318800
chr1 154824000 154824010 LBX2 JASPAR yes 32318801
chr1 154824000 154824010 MIXL1 JASPAR yes 32318802
chr1 154824000 154824010 RAX JASPAR yes 32318803
chr1 154824001 154824009 ISX JASPAR yes 32318804
chr1 154824001 154824009 LHX9 JASPAR yes 32318805
chr1 154824001 154824009 LMX1B JASPAR yes 32318806
chr1 154824001 154824009 PRRX1 JASPAR yes 32318807
chr1 154824001 154824009 RAX2 JASPAR yes 32318808
chr1 154824001 154824009 SHOX JASPAR yes 32318809
chr1 154824001 154824009 UNCX JASPAR yes 32318810
Genes associated with rs76999858[chr1:154824002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 154377669 154441926 + IL6R ENSG00000160712.8 154377669 382076 Ovary 0.336437 1300
chr1 155107820 155111329 + SLC50A1 ENSG00000169241.13 155107820 283818 Uterus 0.0272547 1323