EnhancerDB
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  3. rs77196963[chr12:46563241]
Enhancers that have rs77196963[chr12:46563241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs77196963[chr12:46563241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46561810 46563550 ZNF274 GTRD no Cervix (HeLa-S3) 21540896
chr12 46561850 46563426 ZBTB33 GTRD no Lung (A549) 21540897
chr12 46561856 46563440 ZBTB33 GTRD no Lung (A549) 21540898
chr12 46561860 46564028 ZNF274 GTRD no Cervix (HeLa-S3) 21540899
chr12 46561899 46563472 ZBTB33 GTRD no Lung (A549) 21540901
chr12 46561927 46563699 ZNF274 GTRD no Cervix (HeLa-S3) 21540903
chr12 46561943 46563519 ZNF274 GTRD no Cervix (HeLa-S3) 21540904
chr12 46561944 46563473 ZNF274 GTRD no Cervix (HeLa-S3) 21540905
chr12 46561967 46563539 ZNF274 GTRD no Cervix (HeLa-S3) 21540906
chr12 46562010 46563556 ZNF274 GTRD no Cervix (HeLa-S3) 21540907
chr12 46562060 46563346 ZBTB33 GTRD no Lung (A549) 21540908
chr12 46562096 46563348 ZBTB33 GTRD no Brain (SK-N-SH) 21540909
chr12 46562106 46563340 ZNF274 GTRD no Cervix (HeLa-S3) 21540910
chr12 46562108 46563317 ZBTB33 GTRD no Brain (SK-N-SH) 21540911
chr12 46562116 46563556 ZNF274 GTRD no Cervix (HeLa-S3) 21540913
chr12 46562129 46563537 ZBTB33 GTRD no Lung (A549) 21540914
chr12 46562166 46563275 ZBTB33 GTRD no Lung (A549) 21540915
chr12 46562168 46563335 ZBTB33 GTRD no Brain (SK-N-SH) 21540916
chr12 46562191 46563345 ZNF274 GTRD no Cervix (HeLa-S3) 21540918
chr12 46562196 46563283 ZNF274 GTRD no Cervix (HeLa-S3) 21540919
chr12 46562233 46563347 ZBTB33 GTRD no Lung (A549) 21540921
chr12 46562267 46563313 ZBTB33 GTRD no Lung (A549) 21540922
chr12 46562460 46563320 ZBTB33 GTRD no Brain (SK-N-SH) 21540924
chr12 46562558 46563295 ZBTB33 GTRD no Brain (SK-N-SH) 21540925
chr12 46562561 46563391 ZNF274 GTRD no Cervix (HeLa-S3) 21540926
chr12 46562593 46563301 ZNF274 GTRD no Cervix (HeLa-S3) 21540927
chr12 46562614 46563254 ZBTB33 GTRD no Brain (SK-N-SH) 21540928
chr12 46562622 46563400 ZBTB33 GTRD no Brain (SK-N-SH) 21540929
chr12 46562623 46563350 ZBTB33 GTRD no Brain (SK-N-SH) 21540930
chr12 46562646 46563387 ZBTB33 GTRD no Brain (SK-N-SH) 21540932
chr12 46562655 46563300 ZBTB33 GTRD no Brain (SK-N-SH) 21540933
chr12 46562662 46563277 ZNF274 GTRD no Cervix (HeLa-S3) 21540934
chr12 46562667 46563286 ZNF274 GTRD no Cervix (HeLa-S3) 21540935
chr12 46562669 46563286 ZNF274 GTRD no Cervix (HeLa-S3) 21540936
chr12 46562672 46563268 ZBTB33 GTRD no Brain (SK-N-SH) 21540937
chr12 46562712 46563353 ZBTB33 GTRD no Brain (SK-N-SH) 21540938
chr12 46562720 46563345 ZBTB33 GTRD no Brain (SK-N-SH) 21540939
chr12 46562723 46563349 ZBTB33 GTRD no Brain (SK-N-SH) 21540940
chr12 46562734 46563252 ZBTB33 GTRD no Lung (A549) 21540941
chr12 46562749 46563339 ZBTB33 GTRD no Lung (A549) 21540942
chr12 46562788 46563338 ZBTB33 GTRD no Brain (SK-N-SH) 21540944
chr12 46562858 46563348 ZNF274 GTRD no Cervix (HeLa-S3) 21540946
chr12 46562879 46563331 ZBTB33 GTRD no Brain (SK-N-SH) 21540947
chr12 46562913 46563291 ZBTB33 GTRD no Lung (A549) 21540949
chr12 46563232 46563246 ONECUT1 JASPAR yes 120601094
chr12 46563234 46563243 VENTX JASPAR yes 120601095
chr12 46563234 46563248 ONECUT1 JASPAR yes 120601096
chr12 46563234 46563248 ONECUT2 JASPAR yes 120601097
chr12 46563235 46563245 CUX1 JASPAR yes 120601098
chr12 46563235 46563245 CUX2 JASPAR yes 120601099
chr12 46563235 46563245 PAX3 JASPAR yes 120601100
chr12 46563235 46563245 PAX7 JASPAR yes 120601101
Genes associated with rs77196963[chr12:46563241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More