EnhancerDB
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  3. rs77252769[chr17:70369872]
Enhancers that have rs77252769[chr17:70369872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs77252769[chr17:70369872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70369066 70369883 ZNF143 GTRD no Epithelial (MCF-7) 21784360
chr17 70369136 70369943 ZNF274 GTRD no Cervix (HeLa-S3) 21784361
chr17 70369199 70369943 ZNF274 GTRD no Cervix (HeLa-S3) 21784362
chr17 70369241 70369927 ZNF143 GTRD no Epithelial (MCF-7) 21784365
chr17 70369336 70369889 ZNF143 GTRD no Epithelial (MCF-7) 21784368
chr17 70369357 70369932 ZNF274 GTRD no Blood (GM12878) 21784369
chr17 70369863 70369877 SPIC JASPAR yes 55779401
chr17 70369869 70369879 GABPA JASPAR yes 55779402
chr17 70369871 70369877 ETS1 JASPAR yes 55779403
chr17 70369871 70369877 SPI1 JASPAR yes 55779404
chr17 70369872 70369883 YY2 JASPAR yes 55779405
Genes associated with rs77252769[chr17:70369872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More