EnhancerDB
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  3. rs77282820[chr17:39823717]
Enhancers that have rs77282820[chr17:39823717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs77282820[chr17:39823717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39823208 39823852 CTCF UCSC Txn Factor no Conserved 108259398
chr17 39823223 39823847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758184
chr17 39823223 39823847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259402
chr17 39823268 39823835 ZNF274 GTRD no Blood (GM12878) 21758190
chr17 39823268 39823835 ZNF274 GTRD no Blood (GM12878) 108259414
chr17 39823306 39824232 STAT3 GTRD no Blood (OCI-LY7) 108259440
chr17 39823306 39824232 STAT3 GTRD no Blood (OCI-LY7) 108259441
chr17 39823339 39823885 ZNF274 GTRD no Blood (GM12878) 21758215
chr17 39823339 39823885 ZNF274 GTRD no Blood (GM12878) 108259453
chr17 39823346 39824153 ZNF274 GTRD no Blood (GM12878) 21758216
chr17 39823346 39824153 ZNF274 GTRD no Blood (GM12878) 108259455
chr17 39823346 39824153 ZNF274 GTRD no Blood (GM12878) 108259456
chr17 39823392 39824087 ZNF274 GTRD no Blood (GM12878) 21758217
chr17 39823392 39824087 ZNF274 GTRD no Blood (GM12878) 108259457
chr17 39823422 39824345 ZNF274 GTRD no Blood (GM12878) 21758218
chr17 39823422 39824345 ZNF274 GTRD no Blood (GM12878) 108259458
chr17 39823422 39824345 ZNF274 GTRD no Blood (GM12878) 108259459
chr17 39823434 39823859 ZNF274 GTRD no Bone Marrow (K562) 21758219
chr17 39823434 39823859 ZNF274 GTRD no Bone Marrow (K562) 108259460
chr17 39823477 39823819 ZNF274 GTRD no Blood (GM12878) 21758220
chr17 39823477 39823819 ZNF274 GTRD no Blood (GM12878) 108259461
chr17 39823644 39824021 ZNF274 GTRD no Bone Marrow (K562) 21758221
chr17 39823644 39824021 ZNF274 GTRD no Bone Marrow (K562) 108259462
chr17 39823676 39823946 ZNF274 GTRD no Bone Marrow (K562) 21758222
chr17 39823676 39823946 ZNF274 GTRD no Bone Marrow (K562) 108259463
chr17 39823715 39823725 SMAD3 JASPAR yes 54270660
Genes associated with rs77282820[chr17:39823717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 40811323 40819024 + TUBG2 ENSG00000037042.8 40811323 987606 Pancreas 0.255354 15870