EnhancerDB
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  3. rs77297580[chr6:45577407]
Enhancers that have rs77297580[chr6:45577407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 45568305 45585004 enh39021
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Lung (PC-9) Muscle (Myoblast) Epithelial (MCF-7)
Transcript factors that have rs77297580[chr6:45577407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 45577397 45577412 HNF1A JASPAR yes 101909084
chr6 45577398 45577411 HNF1B JASPAR yes 101909085
chr6 45577398 45577412 POU4F1 JASPAR yes 101909086
chr6 45577398 45577414 POU4F2 JASPAR yes 101909087
chr6 45577398 45577414 POU4F3 JASPAR yes 101909088
chr6 45577401 45577411 LHX6 JASPAR yes 101909089
chr6 45577401 45577411 MNX1 JASPAR yes 101909090
chr6 45577401 45577411 POU6F1 JASPAR yes 101909091
chr6 45577402 45577410 LMX1A JASPAR yes 101909092
chr6 45577402 45577410 LMX1B JASPAR yes 101909093
chr6 45577402 45577410 NKX6-1 JASPAR yes 101909094
chr6 45577402 45577410 NKX6-2 JASPAR yes 101909095
chr6 45577402 45577410 VAX1 JASPAR yes 101909096
chr6 45577402 45577410 VAX2 JASPAR yes 101909097
chr6 45577402 45577410 VSX1 JASPAR yes 101909098
chr6 45577402 45577410 VSX2 JASPAR yes 101909099
Genes associated with rs77297580[chr6:45577407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More