EnhancerDB
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  3. rs77508258[chr16:11199478]
Enhancers that have rs77508258[chr16:11199478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11167765 11210995 enh3882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77508258[chr16:11199478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11197873 11199658 ZNF274 GTRD no Cervix (HeLa-S3) 21689563
chr16 11197873 11199658 ZNF274 GTRD no Cervix (HeLa-S3) 108180195
chr16 11198508 11199576 ZNF274 GTRD no Cervix (HeLa-S3) 21689566
chr16 11198508 11199576 ZNF274 GTRD no Cervix (HeLa-S3) 108180198
chr16 11198555 11199555 ZNF143 GTRD no Epithelial (MCF-7) 108180199
chr16 11198585 11199612 ZNF143 GTRD no Epithelial (MCF-7) 108180201
chr16 11198669 11199494 TCF7L2 GTRD no Colon (HCT116) 21689576
chr16 11198669 11199494 TCF7L2 GTRD no Colon (HCT116) 108180215
chr16 11198700 11199584 ZNF274 GTRD no Cervix (HeLa-S3) 21689581
chr16 11198700 11199584 ZNF274 GTRD no Cervix (HeLa-S3) 108180225
chr16 11198710 11199778 ZNF274 GTRD no Bone Marrow (K562) 21689584
chr16 11198710 11199778 ZNF274 GTRD no Bone Marrow (K562) 108180228
chr16 11198732 11199614 ZNF274 GTRD no Bone Marrow (K562) 21689589
chr16 11198732 11199614 ZNF274 GTRD no Bone Marrow (K562) 108180234
chr16 11198808 11199502 ZNF143 GTRD no Epithelial (MCF-7) 108180260
chr16 11198829 11199523 ZNF143 GTRD no Epithelial (MCF-7) 108180270
chr16 11198904 11199628 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21689639
chr16 11198904 11199628 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108180307
chr16 11199091 11199681 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21689664
chr16 11199091 11199681 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108180336
chr16 11199159 11199883 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21689665
chr16 11199159 11199883 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108180337
chr16 11199469 11199480 NFKB1 JASPAR yes 9487501
chr16 11199470 11199480 NFKB1 JASPAR yes 9487502
chr16 11199470 11199480 RELA JASPAR yes 9487503
chr16 11199470 11199480 REL JASPAR yes 9487504
Genes associated with rs77508258[chr16:11199478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More