EnhancerDB
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  3. rs77517828[chr1:169088086]
Enhancers that have rs77517828[chr1:169088086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169076205 169091718 enh12359
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs77517828[chr1:169088086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169088076 169088091 HSF1 JASPAR yes 32984581
chr1 169088080 169088099 RFX2 JASPAR yes 32984582
chr1 169088084 169088100 RFX2 JASPAR yes 32984583
chr1 169088084 169088100 RFX3 JASPAR yes 32984584
chr1 169088084 169088100 RFX4 JASPAR yes 32984585
chr1 169088084 169088100 RFX5 JASPAR yes 32984586
Genes associated with rs77517828[chr1:169088086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More