EnhancerDB
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  3. rs77540568[chr12:105101417]
Enhancers that have rs77540568[chr12:105101417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105086025 105108495 enh29941
Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Thyroid Breast Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Thymus Stomach
chr12 105101205 105101513 vista14730
VISTA
Transcript factors that have rs77540568[chr12:105101417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105100388 105101536 ZBTB33 GTRD no Lung (A549) 108055713
chr12 105100423 105101476 ZNF274 GTRD no Cervix (HeLa-S3) 108055715
chr12 105100446 105101482 ZNF143 GTRD no Epithelial (MCF-7) 108055716
chr12 105100474 105101467 ZNF274 GTRD no Cervix (HeLa-S3) 108055719
chr12 105100491 105101695 ZNF143 GTRD no Epithelial (MCF-7) 108055720
chr12 105100493 105101727 ZNF274 GTRD no Cervix (HeLa-S3) 108055721
chr12 105100503 105101467 ZNF143 GTRD no Epithelial (MCF-7) 108055722
chr12 105100514 105101642 ZNF143 GTRD no Epithelial (MCF-7) 108055723
chr12 105100525 105101472 ZNF274 GTRD no Cervix (HeLa-S3) 108055725
chr12 105100526 105101475 ZBTB33 GTRD no Lung (A549) 108055726
chr12 105100548 105101420 ZNF274 GTRD no Cervix (HeLa-S3) 108055727
chr12 105100562 105101480 ZBTB33 GTRD no Lung (A549) 108055728
chr12 105100588 105101755 ZBTB33 GTRD no Lung (A549) 108055729
chr12 105100623 105101482 ZNF143 GTRD no Epithelial (MCF-7) 108055731
chr12 105100667 105101712 ZBTB33 GTRD no Lung (A549) 108055732
chr12 105100741 105101485 ZNF143 GTRD no Epithelial (MCF-7) 108055734
chr12 105100758 105101435 ZNF143 GTRD no Epithelial (MCF-7) 108055735
chr12 105100777 105101612 ZNF143 GTRD no Epithelial (MCF-7) 108055736
chr12 105100873 105101489 ZNF143 GTRD no Epithelial (MCF-7) 108055737
chr12 105100903 105101530 ZBTB33 GTRD no Lung (A549) 108055738
chr12 105100920 105101442 ZNF143 GTRD no Epithelial (MCF-7) 108055739
chr12 105100934 105101425 ZNF274 GTRD no Liver (HepG2) 108055741
chr12 105100966 105101456 ZNF274 GTRD no Bone Marrow (K562) 108055742
chr12 105100979 105101428 ZNF274 GTRD no Blood (GM12878) 21569761
chr12 105100979 105101428 ZNF274 GTRD no Blood (GM12878) 108055743
chr12 105101029 105101455 ZNF274 GTRD no Cervix (HeLa-S3) 108055746
chr12 105101052 105101493 ZNF274 GTRD no Blood (GM12878) 21569762
chr12 105101052 105101493 ZNF274 GTRD no Blood (GM12878) 108055748
chr12 105101410 105101428 NR3C1 JASPAR yes 82469521
chr12 105101410 105101428 NR3C1 JASPAR yes 123410139
chr12 105101417 105101422 ETS2 TRANSFAC yes 82469522
chr12 105101417 105101422 ETS2 TRANSFAC yes 123410140
Genes associated with rs77540568[chr12:105101417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More