EnhancerDB
  1. Home
  2. SNP
  3. rs778409402[chr12:96612426]
Enhancers that have rs778409402[chr12:96612426]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs778409402[chr12:96612426]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96612414 96612432 MAFF JASPAR yes 123048957
chr12 96612415 96612429 GATA2 JASPAR yes 123048958
chr12 96612415 96612431 SOX8 JASPAR yes 123048959
chr12 96612421 96612442 IRF1 JASPAR yes 123048961
chr12 96612423 96612444 IRF1 JASPAR yes 123048962
chr12 96612424 96612428 YY1 TRANSFAC yes 123048963
chr12 96612424 96612439 FOXP1 JASPAR yes 123048964
chr12 96612425 96612440 FOXP1 JASPAR yes 123048965
chr12 96612426 96612441 FOXP1 JASPAR yes 123048966
Genes associated with rs778409402[chr12:96612426], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More