EnhancerDB
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  3. rs778421730[chr6:37483235]
Enhancers that have rs778421730[chr6:37483235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37480118 37495011 enh49093
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Stomach Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs778421730[chr6:37483235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37483225 37483246 IRF1 JASPAR yes 101415249
chr6 37483229 37483250 IRF1 JASPAR yes 101415250
chr6 37483230 37483251 IRF1 JASPAR yes 101415251
chr6 37483231 37483246 STAT2 JASPAR yes 101415252
chr6 37483231 37483252 IRF1 JASPAR yes 101415253
chr6 37483232 37483253 IRF1 JASPAR yes 101415254
chr6 37483233 37483254 IRF1 JASPAR yes 101415255
chr6 37483234 37483249 FOXP1 JASPAR yes 101415256
chr6 37483234 37483255 IRF1 JASPAR yes 101415257
chr6 37483235 37483250 FOXP1 JASPAR yes 101415258
chr6 37483235 37483256 IRF1 JASPAR yes 101415259
Genes associated with rs778421730[chr6:37483235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More