EnhancerDB
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  3. rs77898650[chr1:12532066]
Enhancers that have rs77898650[chr1:12532066]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12527565 12557135 enh11513
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs77898650[chr1:12532066]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12532052 12532066 ONECUT3 JASPAR yes 26823111
chr1 12532062 12532072 ALX3 JASPAR yes 26823112
chr1 12532062 12532072 ESX1 JASPAR yes 26823113
chr1 12532062 12532072 GSX1 JASPAR yes 26823114
chr1 12532062 12532072 GSX2 JASPAR yes 26823115
chr1 12532062 12532072 HOXB2 JASPAR yes 26823116
chr1 12532062 12532072 HOXB3 JASPAR yes 26823117
chr1 12532062 12532072 LBX2 JASPAR yes 26823118
chr1 12532062 12532072 LHX2 JASPAR yes 26823119
chr1 12532062 12532072 MEOX1 JASPAR yes 26823120
chr1 12532062 12532072 MEOX2 JASPAR yes 26823121
chr1 12532062 12532072 MIXL1 JASPAR yes 26823122
chr1 12532062 12532072 MNX1 JASPAR yes 26823123
chr1 12532062 12532072 NOTO JASPAR yes 26823124
chr1 12532063 12532071 BSX JASPAR yes 26823125
chr1 12532063 12532071 DLX6 JASPAR yes 26823126
chr1 12532063 12532071 EN1 JASPAR yes 26823127
chr1 12532063 12532071 ISX JASPAR yes 26823128
chr1 12532063 12532071 LBX1 JASPAR yes 26823129
chr1 12532063 12532071 LHX9 JASPAR yes 26823130
chr1 12532063 12532071 LMX1A JASPAR yes 26823131
chr1 12532063 12532071 LMX1B JASPAR yes 26823132
chr1 12532063 12532071 NKX6-1 JASPAR yes 26823133
chr1 12532063 12532071 NKX6-2 JASPAR yes 26823134
chr1 12532063 12532071 PAX4 JASPAR yes 26823135
chr1 12532063 12532071 PDX1 JASPAR yes 26823136
chr1 12532063 12532071 PRRX1 JASPAR yes 26823137
chr1 12532063 12532071 RAX2 JASPAR yes 26823138
chr1 12532063 12532071 SHOX JASPAR yes 26823139
chr1 12532063 12532071 UNCX JASPAR yes 26823140
chr1 12532063 12532071 VAX1 JASPAR yes 26823141
chr1 12532063 12532071 VAX2 JASPAR yes 26823142
chr1 12532063 12532071 VSX1 JASPAR yes 26823143
chr1 12532063 12532071 VSX2 JASPAR yes 26823144
chr1 12532063 12532073 HOXD13 JASPAR yes 26823145
chr1 12532063 12532076 DUXA JASPAR yes 26823146
chr1 12532064 12532075 PHOX2A JASPAR yes 26823147
chr1 12532064 12532075 PROP1 JASPAR yes 26823148
Genes associated with rs77898650[chr1:12532066], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More