EnhancerDB
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  3. rs77945487[chr12:53373608]
Enhancers that have rs77945487[chr12:53373608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs77945487[chr12:53373608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53372616 53373854 TCF7L2 GTRD no Colon (HCT116) 21548858
chr12 53373510 53374485 ZBTB33 GTRD no Lung (A549) 21548863
chr12 53373543 53374171 ZNF143 GTRD no Epithelial (MCF-7) 21548864
chr12 53373546 53374490 ZNF274 GTRD no Cervix (HeLa-S3) 21548865
chr12 53373551 53373970 ZNF143 GTRD no Epithelial (MCF-7) 21548866
chr12 53373574 53373943 ZNF274 GTRD no Liver (HepG2) 21548867
chr12 53373587 53373608 IRF1 JASPAR yes 120969681
chr12 53373598 53373617 PAX5 JASPAR yes 120969683
chr12 53373603 53373928 ZBTB33 GTRD no Lung (A549) 21548868
chr12 53373605 53373614 HIC2 JASPAR yes 120969684
chr12 53373606 53373622 ZNF143 JASPAR yes 120969685
chr12 53373608 53373612 LFA1 TRANSFAC yes 120969686
Genes associated with rs77945487[chr12:53373608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More