EnhancerDB
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  3. rs77949678[chr17:80452133]
Enhancers that have rs77949678[chr17:80452133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs77949678[chr17:80452133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80448905 80452854 TCF7L2 GTRD no Colon (HCT116) 21800299
chr17 80450557 80452924 TCF7L2 GTRD no Colon (HCT116) 21800311
chr17 80451038 80453650 TCF7L2 GTRD no Colon (HCT116) 21800320
chr17 80451876 80452837 ZNF143 GTRD no Epithelial (MCF-7) 21800325
chr17 80451947 80452237 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21800326
chr17 80451978 80452228 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800327
chr17 80452044 80452234 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21800328
chr17 80452054 80452343 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800329
chr17 80452113 80452220 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21800330
chr17 80452127 80452146 RFX2 JASPAR yes 56367322
chr17 80452132 80452656 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21800331
Genes associated with rs77949678[chr17:80452133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More