EnhancerDB
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  3. rs78005832[chr1:202012599]
Enhancers that have rs78005832[chr1:202012599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs78005832[chr1:202012599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202011735 202013508 TCF7L2 GTRD no Colon (HCT116) 21365761
chr1 202011874 202014365 TCF7L2 GTRD no Colon (HCT116) 21365763
chr1 202011900 202013986 TCF7L2 GTRD no Colon (HCT116) 21365764
chr1 202012344 202013480 TCF7L2 GTRD no Colon (HCT116) 21365765
chr1 202012439 202012775 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21365766
chr1 202012454 202014088 TCF7L2 GTRD no Colon (HCT116) 21365767
chr1 202012475 202012815 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21365768
chr1 202012477 202012857 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21365769
chr1 202012481 202012851 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21365770
chr1 202012533 202012803 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21365771
chr1 202012534 202012798 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365772
chr1 202012535 202012795 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21365773
chr1 202012535 202012811 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21365774
chr1 202012568 202014020 ZNF143 GTRD no Epithelial (MCF-7) 21365775
chr1 202012570 202013868 ZNF143 GTRD no Epithelial (MCF-7) 21365776
chr1 202012581 202013991 TCF7L2 GTRD no Colon (HCT116) 21365777
chr1 202012590 202012601 E2F6 JASPAR yes 34545636
Genes associated with rs78005832[chr1:202012599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More