EnhancerDB
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  3. rs780434566[chr5:171566904]
Enhancers that have rs780434566[chr5:171566904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs780434566[chr5:171566904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171566899 171566914 MEF2C JASPAR yes 67766722
chr5 171566902 171566917 FOXP1 JASPAR yes 67766723
chr5 171566903 171566918 FOXP1 JASPAR yes 67766724
chr5 171566904 171566919 FOXP1 JASPAR yes 67766725
chr5 171566904 171566925 IRF1 JASPAR yes 67766726
Genes associated with rs780434566[chr5:171566904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More