EnhancerDB
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  3. rs78044997[chr12:123558283]
Enhancers that have rs78044997[chr12:123558283]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123537905 123558786 enh15079
Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Heart
chr12 123557906 123558430 vista15228
VISTA
Transcript factors that have rs78044997[chr12:123558283]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123558265 123558283 ESR2 JASPAR yes 82492703
chr12 123558265 123558283 ESR2 JASPAR yes 124316155
chr12 123558266 123558283 ESR1 JASPAR yes 82492704
chr12 123558266 123558283 ESR1 JASPAR yes 124316156
chr12 123558266 123558284 ESR1 JASPAR yes 82492705
chr12 123558266 123558284 ESR2 JASPAR yes 82492706
chr12 123558266 123558284 ESR1 JASPAR yes 124316157
chr12 123558266 123558284 ESR2 JASPAR yes 124316158
chr12 123558267 123558287 ESR1 JASPAR yes 82492708
chr12 123558267 123558287 ESR1 JASPAR yes 124316160
chr12 123558270 123558612 TCF7L2 GTRD no Colon (HCT116) 21580189
chr12 123558270 123558612 TCF7L2 GTRD no Colon (HCT116) 108066867
chr12 123558270 123558612 TCF7L2 GTRD no Colon (HCT116) 108066868
chr12 123558276 123558286 RORA JASPAR yes 82492709
chr12 123558276 123558286 RORA JASPAR yes 124316161
chr12 123558278 123558289 SPDEF JASPAR yes 82492710
chr12 123558278 123558289 SPDEF JASPAR yes 124316162
chr12 123558281 123558291 RELA JASPAR yes 82492711
chr12 123558281 123558291 REL JASPAR yes 82492712
chr12 123558281 123558291 RELA JASPAR yes 124316163
chr12 123558281 123558291 REL JASPAR yes 124316164
chr12 123558281 123558292 NFKB1 JASPAR yes 82492713
chr12 123558281 123558292 NFKB1 JASPAR yes 124316165
Genes associated with rs78044997[chr12:123558283], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More