EnhancerDB
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Enhancers that have rs78050559[chr16:88367394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs78050559[chr16:88367394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88366824 88367400 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222061
chr16 88366881 88367605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736101
chr16 88366881 88367605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222081
chr16 88366887 88367547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736103
chr16 88366887 88367547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222083
chr16 88366901 88367477 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222087
chr16 88366913 88367563 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736106
chr16 88366913 88367563 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222090
chr16 88366947 88367403 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736109
chr16 88366947 88367403 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222093
chr16 88366948 88367432 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222095
chr16 88366984 88367400 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736112
chr16 88366984 88367400 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222097
chr16 88367006 88367396 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736114
chr16 88367006 88367396 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222099
chr16 88367025 88367435 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222101
chr16 88367029 88367399 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736115
chr16 88367029 88367399 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222102
chr16 88367035 88367525 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736116
chr16 88367035 88367525 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222103
chr16 88367167 88367438 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736120
chr16 88367167 88367438 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222107
chr16 88367340 88367916 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736121
chr16 88367394 88367404 NKX2-3 JASPAR yes 12279871
Genes associated with rs78050559[chr16:88367394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More