EnhancerDB
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  3. rs78063902[chr18:57620540]
Enhancers that have rs78063902[chr18:57620540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57615485 57630775 enh4882
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs78063902[chr18:57620540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57619977 57622784 ZNF274 GTRD no Bone Marrow (K562) 108339086
chr18 57620097 57620727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825416
chr18 57620172 57620580 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825417
chr18 57620186 57620557 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825418
chr18 57620217 57620547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825419
chr18 57620227 57620637 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21825420
chr18 57620235 57620575 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825422
chr18 57620240 57620550 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825423
chr18 57620370 57620890 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825430
chr18 57620397 57620993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825431
chr18 57620397 57620993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108339087
chr18 57620402 57620778 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825432
chr18 57620449 57620905 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825433
chr18 57620467 57620540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825434
chr18 57620525 57620881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825435
chr18 57620540 57620545 GATA1 TRANSFAC yes 111067652
Genes associated with rs78063902[chr18:57620540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More