EnhancerDB
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  3. rs78081346[chr1:108478653]
Enhancers that have rs78081346[chr1:108478653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108474065 108488635 enh548
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs78081346[chr1:108478653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108478111 108478701 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21326372
chr1 108478111 108478701 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107817655
chr1 108478485 108479114 ZNF274 GTRD no Bone Marrow (K562) 107817676
chr1 108478646 108478666 RREB1 JASPAR yes 31370379
chr1 108478650 108478660 HOXC10 JASPAR yes 31370380
chr1 108478650 108478660 HOXD11 JASPAR yes 31370381
chr1 108478650 108478661 HOXA10 JASPAR yes 31370382
chr1 108478650 108478661 HOXC11 JASPAR yes 31370383
chr1 108478650 108478661 HOXC12 JASPAR yes 31370384
chr1 108478650 108478661 HOXD12 JASPAR yes 31370385
chr1 108478651 108478660 CDX1 JASPAR yes 31370386
chr1 108478651 108478662 CDX2 JASPAR yes 31370387
Genes associated with rs78081346[chr1:108478653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More