EnhancerDB
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  3. rs78096780[chr1:222003423]
Enhancers that have rs78096780[chr1:222003423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1 222002644 222003471 vista5226
VISTA
Transcript factors that have rs78096780[chr1:222003423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222002849 222003425 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107872228
chr1 222003419 222003433 TCF7L2 JASPAR yes 35572707
chr1 222003419 222003433 TCF7L2 JASPAR yes 118465106
Genes associated with rs78096780[chr1:222003423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More