EnhancerDB
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  3. rs78130360[chr1:202007206]
Enhancers that have rs78130360[chr1:202007206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs78130360[chr1:202007206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202005749 202008651 ZNF274 GTRD no Bone Marrow (K562) 107857424
chr1 202006583 202008707 ZNF143 GTRD no Epithelial (MCF-7) 21365575
chr1 202006583 202008707 ZNF143 GTRD no Epithelial (MCF-7) 107857425
chr1 202006677 202008490 ZNF274 GTRD no Bone Marrow (K562) 107857426
chr1 202006897 202008937 ZNF274 GTRD no Bone Marrow (K562) 107857427
chr1 202007015 202008445 ZBTB33 GTRD no Lung (A549) 107857428
chr1 202007132 202008772 ZNF274 GTRD no Bone Marrow (K562) 107857429
chr1 202007155 202008962 ZNF274 GTRD no Cervix (HeLa-S3) 21365578
chr1 202007155 202008962 ZNF274 GTRD no Cervix (HeLa-S3) 107857430
chr1 202007165 202008553 ZBTB33 GTRD no Lung (A549) 107857431
chr1 202007200 202007208 GATA1 TRANSFAC yes 34544744
chr1 202007205 202007216 TBX20 JASPAR yes 34544745
chr1 202007205 202007216 TBX2 JASPAR yes 34544746
chr1 202007205 202007218 EOMES JASPAR yes 34544747
chr1 202007206 202007214 MGA JASPAR yes 34544748
chr1 202007206 202007214 TBX15 JASPAR yes 34544749
chr1 202007206 202007214 TBX1 JASPAR yes 34544750
chr1 202007206 202007214 TBX4 JASPAR yes 34544751
chr1 202007206 202007214 TBX5 JASPAR yes 34544752
chr1 202007206 202007216 TBR1 JASPAR yes 34544753
Genes associated with rs78130360[chr1:202007206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More