EnhancerDB
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Enhancers that have rs78132843[chr1:202011604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs78132843[chr1:202011604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202008912 202011625 ZNF274 GTRD no Cervix (HeLa-S3) 21365636
chr1 202008918 202011621 ZNF274 GTRD no Cervix (HeLa-S3) 21365637
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009074 202011702 ZNF274 GTRD no Liver (HepG2) 21365641
chr1 202009074 202012363 ZNF274 GTRD no Cervix (HeLa-S3) 21365642
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202009172 202011681 TCF7L2 GTRD no Colon (HCT116) 21365647
chr1 202009486 202011875 ZNF143 GTRD no Epithelial (MCF-7) 21365684
chr1 202009586 202011619 TCF7L2 GTRD no Colon (HCT116) 21365693
chr1 202009633 202011835 TCF7L2 GTRD no Colon (HCT116) 21365698
chr1 202009654 202011622 TCF7L2 GTRD no Colon (HCT116) 21365701
chr1 202009959 202011677 ZNF143 GTRD no Epithelial (MCF-7) 21365714
chr1 202011113 202011757 ZNF274 GTRD no Liver (HepG2) 21365758
chr1 202011397 202011609 ZNF274 GTRD no Liver (HepG2) 21365759
chr1 202011469 202011752 ZNF143 GTRD no Epithelial (MCF-7) 21365760
chr1 202011594 202011605 RUNX1 JASPAR yes 34545502
Genes associated with rs78132843[chr1:202011604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More