EnhancerDB
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  3. rs78138190[chr16:85181059]
Enhancers that have rs78138190[chr16:85181059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78138190[chr16:85181059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85180681 85181157 ZNF274 GTRD no Liver (HepG2) 21720358
chr16 85180838 85181408 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21720359
chr16 85180846 85181316 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21720360
chr16 85180850 85181326 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21720361
chr16 85180883 85181173 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21720362
chr16 85180902 85181418 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21720363
chr16 85180913 85182631 ZNF274 GTRD no Liver (HepG2) 21720364
chr16 85181009 85182543 ZNF274 GTRD no Liver (HepG2) 21720365
chr16 85181021 85182568 ZNF274 GTRD no Liver (HepG2) 21720366
chr16 85181045 85181061 SOX4 JASPAR yes 12025229
chr16 85181046 85181061 SOX21 JASPAR yes 12025230
chr16 85181056 85181067 TBX20 JASPAR yes 12025231
Genes associated with rs78138190[chr16:85181059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More