EnhancerDB
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  3. rs78179060[chr16:19707850]
Enhancers that have rs78179060[chr16:19707850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19704325 19714695 enh16595
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 19707699 19708034 vista22079
VISTA
Transcript factors that have rs78179060[chr16:19707850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19707362 19708336 TCF7L2 GTRD no Colon (HCT116) 108186494
chr16 19707421 19709163 TCF7L2 GTRD no Colon (HCT116) 108186495
chr16 19707446 19708314 ZNF143 GTRD no Epithelial (MCF-7) 21695597
chr16 19707446 19708314 ZNF143 GTRD no Epithelial (MCF-7) 108186496
chr16 19707451 19708705 ZNF143 GTRD no Epithelial (MCF-7) 21695598
chr16 19707451 19708705 ZNF143 GTRD no Epithelial (MCF-7) 108186497
chr16 19707491 19708437 ZNF274 GTRD no Bone Marrow (K562) 108186498
chr16 19707509 19708240 ZNF274 GTRD no Bone Marrow (K562) 108186499
chr16 19707535 19708143 TCF7L2 GTRD no Colon (HCT116) 108186500
chr16 19707569 19707965 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695599
chr16 19707569 19707965 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108186501
chr16 19707575 19707959 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108186502
chr16 19707602 19708040 ZNF274 GTRD no Bone Marrow (K562) 108186503
chr16 19707626 19707916 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695600
chr16 19707626 19707916 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108186504
chr16 19707639 19707949 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108186505
chr16 19707669 19707899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695601
chr16 19707669 19707899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108186506
chr16 19707672 19708032 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108186507
chr16 19707672 19708083 STAT1 UCSC Txn Factor no Conserved 108186508
chr16 19707674 19708083 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695602
chr16 19707674 19708083 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108186509
chr16 19707681 19708031 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108186510
chr16 19707695 19707865 ZNF274 GTRD no Bone Marrow (K562) 108186512
chr16 19707695 19708051 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108186513
chr16 19707801 19707907 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695603
chr16 19707801 19707907 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108186514
chr16 19707850 19707865 HSF1 JASPAR yes 9877151
chr16 19707850 19707865 HSF1 JASPAR yes 49352072
Genes associated with rs78179060[chr16:19707850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More