EnhancerDB
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  3. rs78180576[chr1:220475107]
Enhancers that have rs78180576[chr1:220475107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220466225 220478595 enh12679
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs78180576[chr1:220475107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220474851 220475362 ZNF274 GTRD no Bone Marrow (K562) 21381633
chr1 220475024 220475299 ZNF274 GTRD no Bone Marrow (K562) 21381634
chr1 220475033 220475272 ZNF274 GTRD no Bone Marrow (K562) 21381635
chr1 220475041 220475440 ZNF274 GTRD no Bone Marrow (K562) 21381636
chr1 220475092 220475326 ZNF274 GTRD no Bone Marrow (K562) 21381637
chr1 220475100 220475109 SNAI2 JASPAR yes 35483098
chr1 220475100 220475110 ID4 JASPAR yes 35483099
chr1 220475100 220475110 NHLH1 JASPAR yes 35483100
chr1 220475100 220475110 TCF3 JASPAR yes 35483101
chr1 220475100 220475110 TCF4 JASPAR yes 35483102
Genes associated with rs78180576[chr1:220475107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More