EnhancerDB
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  3. rs781954338[chr17:39935585]
Enhancers that have rs781954338[chr17:39935585]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39926525 39940665 enh17154
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Lung Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs781954338[chr17:39935585]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39935575 39935589 SPI1 JASPAR yes 54275360
chr17 39935575 39935589 SPIC JASPAR yes 54275361
chr17 39935579 39935600 IRF1 JASPAR yes 54275362
chr17 39935580 39935601 IRF1 JASPAR yes 54275363
chr17 39935581 39935585 H1TF2 TRANSFAC yes 54275364
chr17 39935581 39935585 NFE TRANSFAC yes 54275365
chr17 39935581 39935585 SRF TRANSFAC yes 54275366
chr17 39935582 39935603 IRF1 JASPAR yes 54275367
chr17 39935583 39935604 IRF1 JASPAR yes 54275368
chr17 39935584 39935599 FOXP1 JASPAR yes 54275369
chr17 39935584 39935605 IRF1 JASPAR yes 54275370
chr17 39935585 39935600 FOXP1 JASPAR yes 54275371
chr17 39935585 39935606 IRF1 JASPAR yes 54275372
Genes associated with rs781954338[chr17:39935585], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More