EnhancerDB
  1. Home
  2. SNP
  3. rs78197405[chr1:8687388]
Enhancers that have rs78197405[chr1:8687388]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8683665 8706215 enh26519
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Lung (PC-9) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs78197405[chr1:8687388]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8687378 8687389 YY2 JASPAR yes 26578777
chr1 8687384 8687388 YY1 TRANSFAC yes 26578778
chr1 8687384 8687392 HOXA5 JASPAR yes 26578779
Genes associated with rs78197405[chr1:8687388], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More