EnhancerDB
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  3. rs78197520[chr17:1627960]
Enhancers that have rs78197520[chr17:1627960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1621105 1630375 enh4200
Liver (HepG2) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Stomach
Transcript factors that have rs78197520[chr17:1627960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1624944 1630554 ZNF274 GTRD no Blood (GM12878) 21739341
chr17 1624944 1630554 ZNF274 GTRD no Blood (GM12878) 108229101
chr17 1624944 1630554 ZNF274 GTRD no Blood (GM12878) 108229102
chr17 1626192 1630644 ZNF274 GTRD no Blood (GM12878) 21739347
chr17 1626192 1630644 ZNF274 GTRD no Blood (GM12878) 108229136
chr17 1626516 1628536 ZNF274 GTRD no Blood (GM12878) 21739377
chr17 1626516 1628536 ZNF274 GTRD no Blood (GM12878) 108229176
chr17 1626613 1631171 ZNF274 GTRD no Blood (GM12878) 21739378
chr17 1626613 1631171 ZNF274 GTRD no Blood (GM12878) 108229177
chr17 1627949 1627961 HES5 JASPAR yes 52698294
chr17 1627950 1627960 HEY1 JASPAR yes 52698295
chr17 1627950 1627960 HEY2 JASPAR yes 52698296
chr17 1627950 1627960 MAX JASPAR yes 52698297
chr17 1627950 1627960 MNT JASPAR yes 52698298
chr17 1627951 1627963 HINFP JASPAR yes 52698300
Genes associated with rs78197520[chr17:1627960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More