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- rs78200685[chr16:89476806]
Enhancers that have rs78200685[chr16:89476806]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
89459543 |
89478115 |
enh32029 |
|
|
Transcript factors that have rs78200685[chr16:89476806]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
89471231
|
89477494
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21738418
|
|
|
chr16
|
89471231
|
89477494
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108225883
|
|
|
chr16
|
89471231
|
89477494
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108225884
|
|
|
chr16
|
89475823
|
89477089
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108225936
|
|
|
chr16
|
89475850
|
89479542
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108225937
|
|
|
chr16
|
89475877
|
89477376
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21738427
|
|
|
chr16
|
89475877
|
89477376
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108225938
|
|
|
chr16
|
89475923
|
89477118
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108225939
|
|
|
chr16
|
89476802
|
89476813
|
CDX2
|
JASPAR
|
yes
|
|
12341612
|
|
|
chr16
|
89476802
|
89476817
|
FOXP1
|
JASPAR
|
yes
|
|
12341613
|
|
|
chr16
|
89476803
|
89476814
|
HOXA10
|
JASPAR
|
yes
|
|
12341614
|
|
|
chr16
|
89476805
|
89476816
|
FOXP2
|
JASPAR
|
yes
|
|
12341615
|
|
Genes associated with rs78200685[chr16:89476806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
88922628
|
88929094
|
+
|
TRAPPC2L
|
ENSG00000167515.6
|
88922628
|
547712
|
Thyroid
|
0.0245227
|
15167
|
|