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- rs78201030[chr1:52131542]
Enhancers that have rs78201030[chr1:52131542]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
52122845 |
52134475 |
enh26695 |
|
|
Transcript factors that have rs78201030[chr1:52131542]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
52131376
|
52132323
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
107803609
|
|
|
chr1
|
52131442
|
52132094
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
107803610
|
|
|
chr1
|
52131531
|
52131542
|
FOXB1
|
JASPAR
|
yes
|
|
28861373
|
|
|
chr1
|
52131532
|
52131543
|
FOXB1
|
JASPAR
|
yes
|
|
28861375
|
|
|
chr1
|
52131534
|
52131542
|
FOXL1
|
JASPAR
|
yes
|
|
28861376
|
|
|
chr1
|
52131539
|
52131550
|
FOXC1
|
JASPAR
|
yes
|
|
28861377
|
|
|
chr1
|
52131540
|
52131544
|
YY1
|
TRANSFAC
|
yes
|
|
28861378
|
|
Genes associated with rs78201030[chr1:52131542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
51426417
|
51440305
|
+
|
CDKN2C
|
ENSG00000123080.6
|
51426417
|
691237
|
Breast
|
0.23119
|
685
|
|