EnhancerDB
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  3. rs78213229[chr3:150089485]
Enhancers that have rs78213229[chr3:150089485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 150078345 150098415 enh21029
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Uterus Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78213229[chr3:150089485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 150089362 150090072 POLR2A UCSC Txn Factor no Conserved 108530694
chr3 150089476 150089486 ALX3 JASPAR yes 6568707
chr3 150089476 150089486 GSX1 JASPAR yes 6568708
chr3 150089476 150089486 GSX2 JASPAR yes 6568709
chr3 150089476 150089486 HOXB2 JASPAR yes 6568710
chr3 150089476 150089486 HOXB3 JASPAR yes 6568711
chr3 150089476 150089486 MEOX2 JASPAR yes 6568712
chr3 150089476 150089486 MIXL1 JASPAR yes 6568713
chr3 150089476 150089486 MNX1 JASPAR yes 6568714
chr3 150089477 150089485 DLX6 JASPAR yes 6568715
chr3 150089477 150089485 EN1 JASPAR yes 6568716
chr3 150089477 150089485 LBX1 JASPAR yes 6568717
chr3 150089477 150089485 PAX4 JASPAR yes 6568718
chr3 150089477 150089485 PDX1 JASPAR yes 6568719
chr3 150089477 150089485 VAX1 JASPAR yes 6568720
chr3 150089477 150089485 VAX2 JASPAR yes 6568721
chr3 150089477 150089485 VSX1 JASPAR yes 6568722
chr3 150089477 150089485 VSX2 JASPAR yes 6568723
Genes associated with rs78213229[chr3:150089485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More