EnhancerDB
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  3. rs78221516[chr1:28496748]
Enhancers that have rs78221516[chr1:28496748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28493545 28502817 enh184
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Epithelial (MCF-7)
chr1 28496557 28496804 vista993
VISTA
Transcript factors that have rs78221516[chr1:28496748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28496553 28496817 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802653
chr1 28496738 28496752 GLIS3 JASPAR yes 27749367
chr1 28496738 28496752 GLIS3 JASPAR yes 118262417
chr1 28496747 28496758 FOXA1 JASPAR yes 27749368
chr1 28496747 28496758 FOXA1 JASPAR yes 118262418
chr1 28496747 28496767 TBX19 JASPAR yes 27749369
chr1 28496747 28496767 TBX19 JASPAR yes 118262419
Genes associated with rs78221516[chr1:28496748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More