EnhancerDB
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  3. rs78250488[chr2:238791556]
Enhancers that have rs78250488[chr2:238791556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238789822 238819991 enh19403
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78250488[chr2:238791556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238791548 238791559 USF2 JASPAR yes 82142015
chr2 238791556 238791571 TFAP2A JASPAR yes 82142016
chr2 238791556 238791571 TFAP2C JASPAR yes 82142017
Genes associated with rs78250488[chr2:238791556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More