EnhancerDB
  1. Home
  2. SNP
  3. rs78252049[chr1:172866536]
Enhancers that have rs78252049[chr1:172866536]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs78252049[chr1:172866536]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172866528 172866537 SOX9 JASPAR yes 33162783
chr1 172866531 172866542 PHOX2A JASPAR yes 33162784
chr1 172866531 172866542 PROP1 JASPAR yes 33162785
Genes associated with rs78252049[chr1:172866536], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More