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- rs78275281[chr17:38484328]
Enhancers that have rs78275281[chr17:38484328]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
38463228 |
38485935 |
enh4408 |
|
|
Transcript factors that have rs78275281[chr17:38484328]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
38484058
|
38485526
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108254718
|
|
|
chr17
|
38484139
|
38484781
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108254719
|
|
|
chr17
|
38484173
|
38484791
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108254720
|
|
|
chr17
|
38484321
|
38484341
|
ESR1
|
JASPAR
|
yes
|
|
54206236
|
|
|
chr17
|
38484324
|
38484342
|
ESR2
|
JASPAR
|
yes
|
|
54206237
|
|
|
chr17
|
38484326
|
38484341
|
ESR2
|
JASPAR
|
yes
|
|
54206238
|
|
|
chr17
|
38484327
|
38484331
|
LFA1
|
TRANSFAC
|
yes
|
|
54206239
|
|
Genes associated with rs78275281[chr17:38484328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
37844167
|
37886679
|
+
|
ERBB2
|
ENSG00000141736.9
|
37844167
|
597649
|
Esophagus
|
0.0583159
|
15745
|
|