EnhancerDB
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  3. rs78288906[chr1:172883046]
Enhancers that have rs78288906[chr1:172883046]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 172882769 172883147 vista3925
VISTA
Transcript factors that have rs78288906[chr1:172883046]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172882070 172886039 ZNF274 GTRD no Bone Marrow (K562) 107846255
chr1 172882220 172883137 ZNF143 GTRD no Epithelial (MCF-7) 21350436
chr1 172882220 172883137 ZNF143 GTRD no Epithelial (MCF-7) 107846256
chr1 172882979 172883475 ZNF274 GTRD no Bone Marrow (K562) 107846257
chr1 172883040 172883048 EHF JASPAR yes 33165444
chr1 172883040 172883048 EHF JASPAR yes 118400626
chr1 172883042 172883047 ETS2 TRANSFAC yes 33165445
chr1 172883042 172883047 ETS2 TRANSFAC yes 118400627
chr1 172883042 172883055 ELF3 JASPAR yes 33165446
chr1 172883042 172883055 ELF3 JASPAR yes 118400628
chr1 172883043 172883054 ELF5 JASPAR yes 33165447
chr1 172883043 172883054 ELF5 JASPAR yes 118400629
chr1 172883043 172883055 EHF JASPAR yes 33165448
chr1 172883043 172883055 ELF4 JASPAR yes 33165449
chr1 172883043 172883055 EHF JASPAR yes 118400630
chr1 172883043 172883055 ELF4 JASPAR yes 118400631
chr1 172883044 172883052 EHF JASPAR yes 33165450
chr1 172883044 172883052 EHF JASPAR yes 118400632
Genes associated with rs78288906[chr1:172883046], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More