EnhancerDB
  1. Home
  2. SNP
  3. rs78297570[chr2:235199067]
Enhancers that have rs78297570[chr2:235199067]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235192981 235207115 enh6214
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs78297570[chr2:235199067]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235199058 235199072 TLX1 JASPAR yes 81862916
chr2 235199059 235199073 TLX1 JASPAR yes 81862917
Genes associated with rs78297570[chr2:235199067], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More