EnhancerDB
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  3. rs78317231[chr12:117049050]
Enhancers that have rs78317231[chr12:117049050]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 117049040 117049175 vista15046
VISTA
Transcript factors that have rs78317231[chr12:117049050]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117047684 117049219 ZNF274 GTRD no Liver (HepG2) 108061873
chr12 117047730 117049541 ZNF143 GTRD no Epithelial (MCF-7) 21577822
chr12 117047730 117049541 ZNF143 GTRD no Epithelial (MCF-7) 108061874
chr12 117047865 117049098 ZNF274 GTRD no Liver (HepG2) 108061875
chr12 117047916 117049493 TCF7L2 GTRD no Colon (HCT116) 21577829
chr12 117047916 117049493 TCF7L2 GTRD no Colon (HCT116) 108061877
chr12 117047955 117049571 ZNF143 GTRD no Epithelial (MCF-7) 21577833
chr12 117047955 117049571 ZNF143 GTRD no Epithelial (MCF-7) 108061878
chr12 117047962 117049168 ZNF274 GTRD no Liver (HepG2) 108061879
chr12 117048224 117049293 ZNF274 GTRD no Blood (GM12878) 108061880
chr12 117048290 117049579 ZNF274 GTRD no Bone Marrow (K562) 21577852
chr12 117048290 117049579 ZNF274 GTRD no Bone Marrow (K562) 108061881
chr12 117048371 117049187 ZNF143 GTRD no Epithelial (MCF-7) 21577853
chr12 117048371 117049187 ZNF143 GTRD no Epithelial (MCF-7) 108061882
chr12 117048942 117049218 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21577854
chr12 117048942 117049218 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061883
chr12 117048993 117049229 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061884
chr12 117049000 117049845 ZNF274 GTRD no Bone Marrow (K562) 21577855
chr12 117049000 117049845 ZNF274 GTRD no Bone Marrow (K562) 108061885
chr12 117049037 117049050 ELF1 JASPAR yes 82484446
chr12 117049037 117049050 ELF1 JASPAR yes 124015162
chr12 117049043 117049064 IRF1 JASPAR yes 82484450
chr12 117049043 117049064 IRF1 JASPAR yes 124015166
chr12 117049046 117049222 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21577856
chr12 117049046 117049222 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108061886
chr12 117049047 117049061 SPI1 JASPAR yes 82484451
chr12 117049047 117049061 SPI1 JASPAR yes 124015167
Genes associated with rs78317231[chr12:117049050], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More