EnhancerDB
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  3. rs78362906[chr1:108600490]
Enhancers that have rs78362906[chr1:108600490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108582385 108602455 enh12117
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Placenta Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs78362906[chr1:108600490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108600175 108600888 ZBTB33 GTRD no Brain (SK-N-SH) 107817889
chr1 108600271 108600567 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107817891
chr1 108600305 108600569 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107817892
chr1 108600469 108600490 IRF1 JASPAR yes 31381188
Genes associated with rs78362906[chr1:108600490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 109234945 109244425 + PRPF38B ENSG00000134186.7 109234945 634455 Esophagus 0.298332 960