EnhancerDB
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  3. rs78370089[chr12:110554906]
Enhancers that have rs78370089[chr12:110554906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110527065 110555975 enh2590
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs78370089[chr12:110554906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110554899 110554910 CDX2 JASPAR yes 123678096
chr12 110554900 110554911 HOXA10 JASPAR yes 123678097
chr12 110554900 110554916 SOX8 JASPAR yes 123678098
chr12 110554901 110554910 CDX1 JASPAR yes 123678099
chr12 110554901 110554911 HOXA13 JASPAR yes 123678100
chr12 110554901 110554911 HOXB13 JASPAR yes 123678101
chr12 110554901 110554911 HOXD13 JASPAR yes 123678102
Genes associated with rs78370089[chr12:110554906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More